From 2a4585939320e44c5f154744bd4e4abc4019ce0c Mon Sep 17 00:00:00 2001 From: mbsantiago Date: Wed, 23 Apr 2025 23:19:08 +0100 Subject: [PATCH] Run lint fix --- batdetect2/cli/data.py | 6 ++++-- batdetect2/plotting/heatmaps.py | 1 - batdetect2/train/callbacks.py | 1 - batdetect2/train/legacy/train.py | 2 +- batdetect2/train/legacy/train_utils.py | 2 +- tests/test_train/test_labels.py | 1 - 6 files changed, 6 insertions(+), 7 deletions(-) diff --git a/batdetect2/cli/data.py b/batdetect2/cli/data.py index 185476d..94b7dac 100644 --- a/batdetect2/cli/data.py +++ b/batdetect2/cli/data.py @@ -35,6 +35,8 @@ def summary( ): base_dir = base_dir or Path.cwd() dataset = load_dataset_from_config( - dataset_config, field=field, base_dir=base_dir + dataset_config, + field=field, + base_dir=base_dir, ) - print(f"Number of annotated clips: {len(dataset.clip_annotations)}") + print(f"Number of annotated clips: {len(dataset)}") diff --git a/batdetect2/plotting/heatmaps.py b/batdetect2/plotting/heatmaps.py index 4927d86..a3df74a 100644 --- a/batdetect2/plotting/heatmaps.py +++ b/batdetect2/plotting/heatmaps.py @@ -2,7 +2,6 @@ from typing import Optional, Tuple -import matplotlib.pyplot as plt import xarray as xr from matplotlib import axes diff --git a/batdetect2/train/callbacks.py b/batdetect2/train/callbacks.py index 998bbbe..cb486b2 100644 --- a/batdetect2/train/callbacks.py +++ b/batdetect2/train/callbacks.py @@ -2,7 +2,6 @@ from lightning import LightningModule, Trainer from lightning.pytorch.callbacks import Callback from torch.utils.data import DataLoader -from batdetect2.evaluate import match_predictions_and_annotations from batdetect2.postprocess import PostprocessorProtocol from batdetect2.train.dataset import LabeledDataset, TrainExample from batdetect2.types import ModelOutput diff --git a/batdetect2/train/legacy/train.py b/batdetect2/train/legacy/train.py index 29fed77..f15fd74 100644 --- a/batdetect2/train/legacy/train.py +++ b/batdetect2/train/legacy/train.py @@ -1,4 +1,4 @@ -from typing import Callable, NamedTuple, Optional +from typing import NamedTuple, Optional import torch from soundevent import data diff --git a/batdetect2/train/legacy/train_utils.py b/batdetect2/train/legacy/train_utils.py index 1d0a6bd..b2987d9 100644 --- a/batdetect2/train/legacy/train_utils.py +++ b/batdetect2/train/legacy/train_utils.py @@ -1,5 +1,5 @@ -import sys import json +import sys from collections import Counter from pathlib import Path from typing import Dict, Generator, List, Optional, Tuple diff --git a/tests/test_train/test_labels.py b/tests/test_train/test_labels.py index 9f55242..91000e4 100644 --- a/tests/test_train/test_labels.py +++ b/tests/test_train/test_labels.py @@ -8,7 +8,6 @@ from batdetect2.targets import TargetConfig, TargetProtocol, build_targets from batdetect2.targets.rois import ROIConfig from batdetect2.targets.terms import TagInfo, TermRegistry from batdetect2.train.labels import generate_heatmaps -from tests.test_targets.test_transform import term_registry recording = data.Recording( samplerate=256_000,