Add targets to data summary command

src/batdetect2/cli/data.py

@@ -22,6 +22,11 @@ def data(): ...
     type=str,
     help="If the dataset info is in a nested field please specify here.",
 )
+@click.option(
+    "--targets",
+    "targets_path",
+    type=click.Path(exists=True),
+)
 @click.option(
     "--base-dir",
     type=click.Path(exists=True),
@@ -30,9 +35,11 @@ def data(): ...
 def summary(
     dataset_config: Path,
     field: Optional[str] = None,
+    targets_path: Optional[Path] = None,
     base_dir: Optional[Path] = None,
 ):
-    from batdetect2.data import load_dataset_from_config
+    from batdetect2.data import compute_class_summary, load_dataset_from_config
+    from batdetect2.targets import load_targets
 
     base_dir = base_dir or Path.cwd()
 
@@ -44,6 +51,15 @@ def summary(
 
     print(f"Number of annotated clips: {len(dataset)}")
 
+    if targets_path is None:
+        return
+
+    targets = load_targets(targets_path)
+
+    summary = compute_class_summary(dataset, targets)
+
+    print(summary.to_markdown())
+
 
 @data.command()
 @click.argument(
@@ -78,15 +94,9 @@ def convert(
 
     base_dir = base_dir or Path.cwd()
 
-    config = load_dataset_config(
-        dataset_config,
-        field=field,
-    )
+    config = load_dataset_config(dataset_config, field=field)
 
-    dataset = load_dataset(
-        config,
-        base_dir=base_dir,
-    )
+    dataset = load_dataset(config, base_dir=base_dir)
 
     annotation_set = data.AnnotationSet(
         clip_annotations=list(dataset),