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conda-dependencies-fix

dev

feat/GH-7-filename-in-console-output

feat/add-chunk-size-to-cli

feat/migrate-to-numpy-2

feat/migrate-to-uv

fix/GH-10-merge-results-index-error

fix/GH-15-spectrogram-features-computation

fix/GH-30-torch-deprecation-warning-weights-only

fix/GH-31-negative-dimension-are-not-allowed

fix/GH-5-time-expansion-is-not-read

fix/handle-empty-files-gracefully

fix/update-dependencies

fix/update-python-version-support

issue-20

main

test/add_audio_files_provided_by_padpadpadpad_to_test_suite

train

#11

#12

#16

#2

#21

#25

#32

#33

#34

#35

#36

#37

#38

#39

#4

#44

#45

#52

#6

#8

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v1.0.1

v1.0.2

v1.0.3

v1.0.4

v1.0.5

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v1.0.8

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• 9410112e41 Create targets.rois module mbsantiago 2025-04-19 19:43:30 +0100
• 07f065cf93 Rename Preprocessor to PreprocessorProtocol mbsantiago 2025-04-19 12:25:41 +0100
• ae6063918c Add documentation on how to use the legacy format mbsantiago 2025-04-19 12:25:20 +0100
• a0a77cada1 Attach a data_source tag to clips loaded from different sources mbsantiago 2025-04-19 12:25:03 +0100
• 355847346e Added a data_source term. mbsantiago 2025-04-19 12:24:38 +0100
• dfd14df7b9 Added a targets protocol mbsantiago 2025-04-19 12:24:24 +0100
• f353aaa08c Added unit tests to legacy annotation loader mbsantiago 2025-04-18 18:39:58 +0100
• bf14f4d37e Added docstrings for the batdetect2 legacy annotation format mbsantiago 2025-04-18 15:14:48 +0100
• b78e5a3a2f Add AOEF loading documentation mbsantiago 2025-04-18 13:53:00 +0100
• f9e005ec8b Add tests for aoef loading mbsantiago 2025-04-18 13:32:50 +0100
• fd7f2b0081 Added unit tests for spectrogram preprocessing mbsantiago 2025-04-17 18:31:24 +0100
• f314942628 Added more docs for preprocessing module mbsantiago 2025-04-17 16:28:48 +0100
• 638f93fe92 Documented the preprocessing module mbsantiago 2025-04-17 15:56:07 +0100
• 19febf2216 Separated the protocols to separate types module mbsantiago 2025-04-17 15:36:21 +0100
• 3417c496db Changed name of PcenScaleConfig to PcenConfig mbsantiago 2025-04-17 15:35:42 +0100
• 4a9af72580 Moved arrays and tensor operations to utils module mbsantiago 2025-04-17 15:35:17 +0100
• 2212246b11 Add documentation to spectrogram mbsantiago 2025-04-17 14:40:20 +0100
• aca0b58443 Add audio test suite mbsantiago 2025-04-17 13:48:21 +0100
• f5071d00a1 Add audio documentation mbsantiago 2025-04-16 19:51:10 +0100
• 23620c2233 Added docstrings to audio module mbsantiago 2025-04-16 19:44:30 +0100
• a9f91322d4 Moved labels.py back to training mbsantiago 2025-04-16 19:44:23 +0100
• 22036743d1 Add target index documentation mbsantiago 2025-04-16 11:01:21 +0100
• eda5f91c86 Update classes mbsantiago 2025-04-16 00:01:37 +0100
• a2ec190b73 Add decode functions to classes module mbsantiago 2025-04-15 23:56:24 +0100
• 04ed669c4f Update gitignore mbsantiago 2025-04-15 22:34:50 +0100
• b796e0bc7b add docs for configs module mbsantiago 2025-04-15 22:34:45 +0100
• 5d4d9a5edf Begin documentation mbsantiago 2025-04-15 20:29:53 +0100
• 55eff0cebd Fix import error mbsantiago 2025-04-15 20:29:29 +0100
• f99653d68f Added labels documentation mbsantiago 2025-04-15 19:33:45 +0100
• 0778663a2c Add extensive documentation for the labels module mbsantiago 2025-04-15 19:25:58 +0100
• 62471664fa Add tests for target.classes mbsantiago 2025-04-15 18:22:19 +0100
• af48c33307 Add target classes module mbsantiago 2025-04-15 07:32:58 +0100
• 02d4779207 Add test for target filtering mbsantiago 2025-04-14 13:31:30 +0100
• d97614a10d Add transform docs mbsantiago 2025-04-13 17:30:39 +0100
• 991529cf86 Create transform module mbsantiago 2025-04-13 16:43:13 +0100
• 02c1d97e5a Add documentation for batdetect2.targets.terms mbsantiago 2025-04-13 14:11:48 +0100
• 3f3f7cd9c8 Add documentation mbsantiago 2025-04-12 18:05:26 +0100
• 2fb3039f17 Create dedicated filtering module mbsantiago 2025-04-12 18:05:20 +0100
• 26a2c5c851 Modify to numpydoc style mbsantiago 2025-04-12 18:05:02 +0100
• b93d4c65c2 Create separate targets module mbsantiago 2025-04-12 16:48:40 +0100
• acda71ea45 Formatting mbsantiago 2025-04-04 10:58:54 +0100
• 98c6da6d42 Removed non needed info on datasets mbsantiago 2025-04-03 16:51:30 +0100
• fe8d044af2 Using basedpyright mbsantiago 2025-04-03 16:50:58 +0100
• 62fa38557e Minor tweaks mbsantiago 2025-04-03 16:50:49 +0100
• 213b6dfd29 Expose model functions mbsantiago 2025-04-03 16:50:20 +0100
• bfa6049adc Expose preprocessing functions mbsantiago 2025-04-03 16:50:06 +0100
• e383a33cbf Improved train module mbsantiago 2025-04-03 16:49:58 +0100
• 7689580a24 Create train config module mbsantiago 2025-04-03 16:49:47 +0100
• 1338ae7431 Better read config nested field mbsantiago 2025-04-03 16:49:21 +0100
• c2c4ac53fd Formatting mbsantiago 2025-04-03 16:49:11 +0100
• ff00da9a9a Removed old data module mbsantiago 2025-04-03 16:48:50 +0100
• 22cf47ed39 Moved lightning module to root module mbsantiago 2025-04-03 16:48:31 +0100
• d9f7304a0f Moved previous code to legacy folders mbsantiago 2025-04-03 16:48:01 +0100
• 451093f2da More structured data module mbsantiago 2025-04-03 16:47:03 +0100
• 30d3a2c92e Start work on expanding cli mbsantiago 2025-04-03 16:46:43 +0100
• c17a25fa75 Remove dvc dependency mbsantiago 2025-04-02 10:00:57 +0100
• 29f7862153 remove dvc mbsantiago 2025-04-02 09:52:44 +0100
• dbc3ff9364 Added more up to date numba version mbsantiago 2025-04-02 09:46:50 +0100
• 4b75e13fa2 Bump version: 1.1.1 → 1.2.0 v1.2.0 mbsantiago 2025-03-12 18:03:43 +0000
• 98bf506634
  Merge pull request #45 from macaodha/feat/add-chunk-size-to-cli Santiago Martinez Balvanera 2025-03-12 18:01:48 +0000
• b4c59f7de1 Added the chunk_size param to the detect command feat/add-chunk-size-to-cli mbsantiago 2025-03-12 17:59:18 +0000
• 54ca555587 Fixed code to support Python3.9 syntax Kavi 2025-02-27 13:51:58 +0100
• 230b6167bc Added load_audio_data() which returns the original sample rate. Changed load_audio() implementation so that it uses load_audio_data but retains its signature. du.process_file() now does not need to call get_samplerate Kavi 2025-02-27 08:10:27 +0100
• f62bc99ab2 Added api method to process a URL Kavi 2025-02-26 14:13:21 +0100
• 47dbdc79c2 Added tests for api and load_audio Kavi 2025-02-26 14:12:42 +0100
• e10e270de4 Fix error in get_samplerate when reading io.BytesIO. Kavi 2025-02-26 14:12:09 +0100
• 6af7fef316 Fix 'unknown' id by providing a _generate_id() function. Kavi 2025-02-26 14:11:11 +0100
• 838a1ade0d Updated get_samplerate test to use example data file. Kavi 2025-02-25 14:46:40 +0100
• 66ac7e608f Changed the signature of api.process_file, au.load_audio and du.process_file. This allows users to use the same args for processing data as librosa.load() Kavi 2025-02-25 14:24:48 +0100
• 150305a273 Format code mbsantiago 2025-02-25 11:25:16 +0000
• 904e8f23ea Update pyright mbsantiago 2025-01-28 19:36:05 +0000
• 48e009fa9d WIP mbsantiago 2025-01-28 19:35:57 +0000
• f7d6516550 WIP mbsantiago 2025-01-23 14:08:55 +0000
• e9e1f7ce2f Lets goo mbsantiago 2025-01-05 20:29:32 +0000
• 113223be02 Add hydra to deps mbsantiago 2024-11-20 11:39:46 +0000
• 35c916482c Added datasets to data folder mbsantiago 2024-11-20 11:31:21 +0000
• 09bd8cf423 Added dvc mbsantiago 2024-11-20 11:29:14 +0000
• f6cdd4e87e Starting to create dataset builders mbsantiago 2024-11-19 22:54:26 +0000
• 9cf159efff Reworking model creation mbsantiago 2024-11-19 19:34:54 +0000
• 36c90a600f Ensure train inputs are almost equal mbsantiago 2024-11-18 18:10:58 +0000
• 1f0fb14d89 Minor restructuring mbsantiago 2024-11-16 21:26:18 +0000
• ee884da8b0 Make sure labels are working in the notebook mbsantiago 2024-11-16 18:23:43 +0000
• 6a9e33c729 Merge branch 'main' into train mbsantiago 2024-11-15 20:10:36 +0000
• 2100a3e483 Bump version: 1.1.0 → 1.1.1 v1.1.1 mbsantiago 2024-11-11 13:01:57 +0000
• 1d3cd2e305 Update lock mbsantiago 2024-11-11 13:01:55 +0000
• d5753b95bb
  Merge pull request #39 from macaodha/fix/handle-empty-files-gracefully Santiago Martinez Balvanera 2024-11-11 12:59:28 +0000
• 69f59ff559 Added the EOFError to the list of expected errors when processing files fix/handle-empty-files-gracefully mbsantiago 2024-11-11 12:44:21 +0000
• 1a11174bc4 Add a test to validate that empty files are handled gracefully mbsantiago 2024-11-11 12:43:46 +0000
• c5c9476e52
  Merge pull request #38 from macaodha/test/add_audio_files_provided_by_padpadpadpad_to_test_suite Santiago Martinez Balvanera 2024-11-11 12:23:03 +0000
• 270b3f212d Created test to verify no errors occurred when running on padpadpadpad recordings test/add_audio_files_provided_by_padpadpadpad_to_test_suite mbsantiago 2024-11-11 12:13:00 +0000
• f61d1d8c72 Add audio files provided by @padpadpadpad to the contrib test files mbsantiago 2024-11-11 12:12:38 +0000
• 4627ddd739
  Merge pull request #37 from macaodha/fix/GH-30-torch-deprecation-warning-weights-only Santiago Martinez Balvanera 2024-11-11 12:02:26 +0000
• 3477d7b5b4 Run the same test with example data instead of random audio fix/GH-30-torch-deprecation-warning-weights-only mbsantiago 2024-11-11 11:57:46 +0000
• 394c66a2ee Added test to validate that changing model loading behaviour did not change model predictions mbsantiago 2024-11-11 11:46:27 +0000
• d085b3212c Added weights_only argument to model loading function mbsantiago 2024-11-11 11:46:06 +0000
• c393c5c29b Bump version: 1.0.8 → 1.1.0 v1.1.0 mbsantiago 2024-11-11 11:18:39 +0000
• 3c22ff28a7 add bump2version config mbsantiago 2024-11-11 11:18:37 +0000
• 7dc28695b2
  Merge pull request #36 from macaodha/fix/GH-31-negative-dimension-are-not-allowed Santiago Martinez Balvanera 2024-11-10 22:53:45 +0000
• 505cca2dea Original test now passing. Issue seems to be fixed fix/GH-31-negative-dimension-are-not-allowed mbsantiago 2024-11-10 22:41:03 +0000
• 7906842a16 Added test to ensure pad_audio function, and utils, are working as expected mbsantiago 2024-11-10 22:39:30 +0000