Commit Graph

Select branches

Hide Pull Requests

conda-dependencies-fix

dev

feat/GH-7-filename-in-console-output

feat/add-chunk-size-to-cli

feat/loosen-dependencies

feat/migrate-to-numpy-2

feat/migrate-to-uv

fix/GH-10-merge-results-index-error

fix/GH-15-spectrogram-features-computation

fix/GH-30-torch-deprecation-warning-weights-only

fix/GH-31-negative-dimension-are-not-allowed

fix/GH-5-time-expansion-is-not-read

fix/handle-empty-files-gracefully

fix/update-dependencies

fix/update-python-version-support

issue-20

main

no_preprocessing

remove_xarray

test/add_audio_files_provided_by_padpadpadpad_to_test_suite

train

train-refactor

#11

#12

#16

#2

#21

#25

#32

#33

#34

#35

#36

#37

#38

#39

#4

#44

#45

#52

#6

#61

#65

#8

v1.0

v1.0.1

v1.0.2

v1.0.3

v1.0.4

v1.0.5

v1.0.6

v1.0.7

v1.0.8

v1.1.0

v1.1.1

v1.2.0

v1.3.0

v1.3.1

v2.0.0b1

Mono Color

• d51e3f8bbd Rollback to single configs module mbsantiago 2025-04-23 23:35:27 +0100
• f3999fbba2 Starting to create a dedicated configs module mbsantiago 2025-04-23 23:19:23 +0100
• 2a45859393 Run lint fix mbsantiago 2025-04-23 23:19:08 +0100
• 86d56d65f4 Added jupyter and marimo group dependencies mbsantiago 2025-04-23 23:15:40 +0100
• 27ba8de463 Updated soundevent mbsantiago 2025-04-23 23:15:29 +0100
• 59bd14bc79 Added clips for random cliping and augmentations mbsantiago 2025-04-23 23:15:08 +0100
• 2396815c13 Add a default target config mbsantiago 2025-04-23 23:14:39 +0100
• ac4bb8f023 Added min and max freq attributes to preprocessor protocol mbsantiago 2025-04-23 23:14:31 +0100
• 6498b6ca37 Added BlockGroups mbsantiago 2025-04-23 23:14:11 +0100
• bfcab0331e Attend test warnings mbsantiago 2025-04-22 09:17:17 +0100
• c276230bff Fix batdetect2 test mbsantiago 2025-04-22 09:08:29 +0100
• e38c446f59 Update gitignore mbsantiago 2025-04-22 09:06:12 +0100
• 24c4831745 Add example annotations mbsantiago 2025-04-22 09:06:06 +0100
• 9fc713d390 Temporary remove compat params module mbsantiago 2025-04-22 09:01:58 +0100
• 285c6a3347 Updating to new Augmentation object mbsantiago 2025-04-22 09:01:46 +0100
• 541be15c9e Update augmentation tests to new structure mbsantiago 2025-04-22 09:00:57 +0100
• 8a463e3942 Remove test migration mbsantiago 2025-04-22 09:00:44 +0100
• 257e1e01bf Fixing small errors in tests mbsantiago 2025-04-22 08:51:21 +0100
• ece1a2073d Fixed errors with extraction test mbsantiago 2025-04-22 08:50:56 +0100
• b82973ca1d Move array and tensor util test to corresponding folder mbsantiago 2025-04-22 08:50:43 +0100
• 7c89e82579 Fixing imports after restructuring mbsantiago 2025-04-22 00:36:34 +0100
• dcae411ccb Add pytest coverage to dev dependencies mbsantiago 2025-04-21 21:26:01 +0100
• ce15afc231 Restructured models module mbsantiago 2025-04-21 21:25:50 +0100
• 096d180ea3 Create an encoder module mbsantiago 2025-04-21 15:28:56 +0100
• ffa4c2e5e9 Remove unnecessary config and build modules mbsantiago 2025-04-21 15:28:47 +0100
• 6c744eaac5 Improved docstrings for blocks mbsantiago 2025-04-21 15:28:26 +0100
• e00674f628 Added better docstrings to types module mbsantiago 2025-04-21 14:06:16 +0100
• 907e05ea48 Minor changes to makefile mbsantiago 2025-04-21 13:21:52 +0100
• 3123d105fd Created a Makefile mbsantiago 2025-04-21 13:18:41 +0100
• 9b6b8a0bf9 Add postprocessing docs mbsantiago 2025-04-20 18:18:58 +0100
• 4aa2e6905c Remove old post_process module mbsantiago 2025-04-20 17:56:07 +0100
• 3abebc9c17 Added working postprocess decoding tests mbsantiago 2025-04-20 17:53:56 +0100
• 1f4454693e Working on postprocess tests mbsantiago 2025-04-20 15:52:25 +0100
• bcf339c40d Updated postprocess module with docstrings mbsantiago 2025-04-20 13:56:18 +0100
• 089328a4f0 Update targets docs mbsantiago 2025-04-19 20:35:34 +0100
• 6236e78414 Update TargetProtocol and related to include rois mbsantiago 2025-04-19 20:26:18 +0100
• 9410112e41 Create targets.rois module mbsantiago 2025-04-19 19:43:30 +0100
• 07f065cf93 Rename Preprocessor to PreprocessorProtocol mbsantiago 2025-04-19 12:25:41 +0100
• ae6063918c Add documentation on how to use the legacy format mbsantiago 2025-04-19 12:25:20 +0100
• a0a77cada1 Attach a data_source tag to clips loaded from different sources mbsantiago 2025-04-19 12:25:03 +0100
• 355847346e Added a data_source term. mbsantiago 2025-04-19 12:24:38 +0100
• dfd14df7b9 Added a targets protocol mbsantiago 2025-04-19 12:24:24 +0100
• f353aaa08c Added unit tests to legacy annotation loader mbsantiago 2025-04-18 18:39:58 +0100
• bf14f4d37e Added docstrings for the batdetect2 legacy annotation format mbsantiago 2025-04-18 15:14:48 +0100
• b78e5a3a2f Add AOEF loading documentation mbsantiago 2025-04-18 13:53:00 +0100
• f9e005ec8b Add tests for aoef loading mbsantiago 2025-04-18 13:32:50 +0100
• fd7f2b0081 Added unit tests for spectrogram preprocessing mbsantiago 2025-04-17 18:31:24 +0100
• f314942628 Added more docs for preprocessing module mbsantiago 2025-04-17 16:28:48 +0100
• 638f93fe92 Documented the preprocessing module mbsantiago 2025-04-17 15:56:07 +0100
• 19febf2216 Separated the protocols to separate types module mbsantiago 2025-04-17 15:36:21 +0100
• 3417c496db Changed name of PcenScaleConfig to PcenConfig mbsantiago 2025-04-17 15:35:42 +0100
• 4a9af72580 Moved arrays and tensor operations to utils module mbsantiago 2025-04-17 15:35:17 +0100
• 2212246b11 Add documentation to spectrogram mbsantiago 2025-04-17 14:40:20 +0100
• aca0b58443 Add audio test suite mbsantiago 2025-04-17 13:48:21 +0100
• f5071d00a1 Add audio documentation mbsantiago 2025-04-16 19:51:10 +0100
• 23620c2233 Added docstrings to audio module mbsantiago 2025-04-16 19:44:30 +0100
• a9f91322d4 Moved labels.py back to training mbsantiago 2025-04-16 19:44:23 +0100
• 22036743d1 Add target index documentation mbsantiago 2025-04-16 11:01:21 +0100
• eda5f91c86 Update classes mbsantiago 2025-04-16 00:01:37 +0100
• a2ec190b73 Add decode functions to classes module mbsantiago 2025-04-15 23:56:24 +0100
• 04ed669c4f Update gitignore mbsantiago 2025-04-15 22:34:50 +0100
• b796e0bc7b add docs for configs module mbsantiago 2025-04-15 22:34:45 +0100
• 5d4d9a5edf Begin documentation mbsantiago 2025-04-15 20:29:53 +0100
• 55eff0cebd Fix import error mbsantiago 2025-04-15 20:29:29 +0100
• f99653d68f Added labels documentation mbsantiago 2025-04-15 19:33:45 +0100
• 0778663a2c Add extensive documentation for the labels module mbsantiago 2025-04-15 19:25:58 +0100
• 62471664fa Add tests for target.classes mbsantiago 2025-04-15 18:22:19 +0100
• af48c33307 Add target classes module mbsantiago 2025-04-15 07:32:58 +0100
• 02d4779207 Add test for target filtering mbsantiago 2025-04-14 13:31:30 +0100
• d97614a10d Add transform docs mbsantiago 2025-04-13 17:30:39 +0100
• 991529cf86 Create transform module mbsantiago 2025-04-13 16:43:13 +0100
• 02c1d97e5a Add documentation for batdetect2.targets.terms mbsantiago 2025-04-13 14:11:48 +0100
• 3f3f7cd9c8 Add documentation mbsantiago 2025-04-12 18:05:26 +0100
• 2fb3039f17 Create dedicated filtering module mbsantiago 2025-04-12 18:05:20 +0100
• 26a2c5c851 Modify to numpydoc style mbsantiago 2025-04-12 18:05:02 +0100
• b93d4c65c2 Create separate targets module mbsantiago 2025-04-12 16:48:40 +0100
• acda71ea45 Formatting mbsantiago 2025-04-04 10:58:54 +0100
• 98c6da6d42 Removed non needed info on datasets mbsantiago 2025-04-03 16:51:30 +0100
• fe8d044af2 Using basedpyright mbsantiago 2025-04-03 16:50:58 +0100
• 62fa38557e Minor tweaks mbsantiago 2025-04-03 16:50:49 +0100
• 213b6dfd29 Expose model functions mbsantiago 2025-04-03 16:50:20 +0100
• bfa6049adc Expose preprocessing functions mbsantiago 2025-04-03 16:50:06 +0100
• e383a33cbf Improved train module mbsantiago 2025-04-03 16:49:58 +0100
• 7689580a24 Create train config module mbsantiago 2025-04-03 16:49:47 +0100
• 1338ae7431 Better read config nested field mbsantiago 2025-04-03 16:49:21 +0100
• c2c4ac53fd Formatting mbsantiago 2025-04-03 16:49:11 +0100
• ff00da9a9a Removed old data module mbsantiago 2025-04-03 16:48:50 +0100
• 22cf47ed39 Moved lightning module to root module mbsantiago 2025-04-03 16:48:31 +0100
• d9f7304a0f Moved previous code to legacy folders mbsantiago 2025-04-03 16:48:01 +0100
• 451093f2da More structured data module mbsantiago 2025-04-03 16:47:03 +0100
• 30d3a2c92e Start work on expanding cli mbsantiago 2025-04-03 16:46:43 +0100
• c17a25fa75 Remove dvc dependency mbsantiago 2025-04-02 10:00:57 +0100
• 29f7862153 remove dvc mbsantiago 2025-04-02 09:52:44 +0100
• dbc3ff9364 Added more up to date numba version mbsantiago 2025-04-02 09:46:50 +0100
• 4b75e13fa2 Bump version: 1.1.1 → 1.2.0 v1.2.0 mbsantiago 2025-03-12 18:03:43 +0000
• 98bf506634
  Merge pull request #45 from macaodha/feat/add-chunk-size-to-cli Santiago Martinez Balvanera 2025-03-12 18:01:48 +0000
• b4c59f7de1 Added the chunk_size param to the detect command feat/add-chunk-size-to-cli mbsantiago 2025-03-12 17:59:18 +0000
• 54ca555587 Fixed code to support Python3.9 syntax Kavi 2025-02-27 13:51:58 +0100
• 230b6167bc Added load_audio_data() which returns the original sample rate. Changed load_audio() implementation so that it uses load_audio_data but retains its signature. du.process_file() now does not need to call get_samplerate Kavi 2025-02-27 08:10:27 +0100
• f62bc99ab2 Added api method to process a URL Kavi 2025-02-26 14:13:21 +0100