batdetect2/tests/test_targets/test_rois.py

305 lines
10 KiB
Python

import numpy as np
import pytest
from soundevent import data
from batdetect2.targets.rois import (
DEFAULT_FREQUENCY_SCALE,
DEFAULT_ANCHOR,
DEFAULT_TIME_SCALE,
SIZE_HEIGHT,
SIZE_WIDTH,
AnchorBBoxMapper,
BBoxAnchorMapperConfig,
_build_bounding_box,
build_roi_mapper,
load_roi_mapper,
)
@pytest.fixture
def sample_bbox() -> data.BoundingBox:
"""A standard bounding box for testing."""
return data.BoundingBox(coordinates=[10.0, 100.0, 20.0, 200.0])
@pytest.fixture
def zero_bbox() -> data.BoundingBox:
"""A bounding box with zero duration and bandwidth."""
return data.BoundingBox(coordinates=[15.0, 150.0, 15.0, 150.0])
@pytest.fixture
def default_encoder() -> AnchorBBoxMapper:
"""A BBoxEncoder with default settings."""
return AnchorBBoxMapper()
@pytest.fixture
def custom_encoder() -> AnchorBBoxMapper:
"""A BBoxEncoder with custom settings."""
return AnchorBBoxMapper(anchor="center", time_scale=1.0, frequency_scale=10.0)
def test_roi_config_defaults():
"""Test ROIConfig default values."""
config = BBoxAnchorMapperConfig()
assert config.anchor == DEFAULT_ANCHOR
assert config.time_scale == DEFAULT_TIME_SCALE
assert config.frequency_scale == DEFAULT_FREQUENCY_SCALE
def test_roi_config_custom():
"""Test creating ROIConfig with custom values."""
config = BBoxAnchorMapperConfig(anchor="center", time_scale=1.0, frequency_scale=10.0)
assert config.anchor == "center"
assert config.time_scale == 1.0
assert config.frequency_scale == 10.0
def test_bbox_encoder_init_defaults(default_encoder):
"""Test BBoxEncoder initialization with default arguments."""
assert default_encoder.position == DEFAULT_ANCHOR
assert default_encoder.time_scale == DEFAULT_TIME_SCALE
assert default_encoder.frequency_scale == DEFAULT_FREQUENCY_SCALE
assert default_encoder.dimension_names == [SIZE_WIDTH, SIZE_HEIGHT]
def test_bbox_encoder_init_custom(custom_encoder):
"""Test BBoxEncoder initialization with custom arguments."""
assert custom_encoder.position == "center"
assert custom_encoder.time_scale == 1.0
assert custom_encoder.frequency_scale == 10.0
assert custom_encoder.dimension_names == [SIZE_WIDTH, SIZE_HEIGHT]
POSITION_TEST_CASES = [
("bottom-left", (10.0, 100.0)),
("bottom-right", (20.0, 100.0)),
("top-left", (10.0, 200.0)),
("top-right", (20.0, 200.0)),
("center-left", (10.0, 150.0)),
("center-right", (20.0, 150.0)),
("top-center", (15.0, 200.0)),
("bottom-center", (15.0, 100.0)),
("center", (15.0, 150.0)),
("centroid", (15.0, 150.0)),
("point_on_surface", (15.0, 150.0)),
]
@pytest.mark.parametrize("position_type, expected_pos", POSITION_TEST_CASES)
def test_bbox_encoder_get_roi_position(
sample_bbox, position_type, expected_pos
):
"""Test get_roi_position for various position types."""
encoder = AnchorBBoxMapper(anchor=position_type)
actual_pos = encoder.encode_position(sample_bbox)
assert actual_pos == pytest.approx(expected_pos)
def test_bbox_encoder_get_roi_position_zero_box(zero_bbox):
"""Test get_roi_position for a zero-sized box."""
encoder = AnchorBBoxMapper(anchor="center")
assert encoder.encode_position(zero_bbox) == pytest.approx((15.0, 150.0))
def test_bbox_encoder_get_roi_size_defaults(sample_bbox, default_encoder):
"""Test get_roi_size with default scaling."""
expected_size = np.array(
[
10.0 * DEFAULT_TIME_SCALE,
100.0 * DEFAULT_FREQUENCY_SCALE,
]
)
actual_size = default_encoder.get_roi_size(sample_bbox)
np.testing.assert_allclose(actual_size, expected_size)
assert actual_size.shape == (2,)
def test_bbox_encoder_get_roi_size_custom(sample_bbox, custom_encoder):
"""Test get_roi_size with custom scaling."""
expected_size = np.array(
[
10.0 * 1.0,
100.0 * 10.0,
]
)
actual_size = custom_encoder.get_roi_size(sample_bbox)
np.testing.assert_allclose(actual_size, expected_size)
assert actual_size.shape == (2,)
def test_bbox_encoder_get_roi_size_zero_box(zero_bbox, default_encoder):
"""Test get_roi_size for a zero-sized box."""
expected_size = np.array([0.0, 0.0])
actual_size = default_encoder.get_roi_size(zero_bbox)
np.testing.assert_allclose(actual_size, expected_size)
BUILD_BOX_TEST_CASES = [
("bottom-left", [50.0, 500.0, 60.0, 600.0]),
("bottom-right", [40.0, 500.0, 50.0, 600.0]),
("top-left", [50.0, 400.0, 60.0, 500.0]),
("top-right", [40.0, 400.0, 50.0, 500.0]),
("center-left", [50.0, 450.0, 60.0, 550.0]),
("center-right", [40.0, 450.0, 50.0, 550.0]),
("top-center", [45.0, 400.0, 55.0, 500.0]),
("bottom-center", [45.0, 500.0, 55.0, 600.0]),
("center", [45.0, 450.0, 55.0, 550.0]),
("centroid", [45.0, 450.0, 55.0, 550.0]),
("point_on_surface", [45.0, 450.0, 55.0, 550.0]),
]
@pytest.mark.parametrize(
"position_type, expected_coords", BUILD_BOX_TEST_CASES
)
def test_build_bounding_box(position_type, expected_coords):
"""Test _build_bounding_box for various position types."""
ref_pos = (50.0, 500.0)
duration = 10.0
bandwidth = 100.0
bbox = _build_bounding_box(
ref_pos, duration, bandwidth, anchor=position_type
)
assert isinstance(bbox, data.BoundingBox)
np.testing.assert_allclose(bbox.coordinates, expected_coords)
def test_build_bounding_box_invalid_position():
"""Test _build_bounding_box raises error for invalid position."""
with pytest.raises(ValueError, match="Invalid position"):
_build_bounding_box(
(0, 0),
1,
1,
anchor="invalid-spot", # type: ignore
)
@pytest.mark.parametrize("position_type, ref_pos", POSITION_TEST_CASES)
def test_bbox_encoder_recover_roi(sample_bbox, position_type, ref_pos):
"""Test recover_roi correctly reconstructs the original bbox."""
encoder = AnchorBBoxMapper(anchor=position_type)
scaled_dims = encoder.encode_size(sample_bbox)
recovered_bbox = encoder.decode(ref_pos, scaled_dims)
assert isinstance(recovered_bbox, data.BoundingBox)
np.testing.assert_allclose(
recovered_bbox.coordinates, sample_bbox.coordinates, atol=1e-6
)
def test_bbox_encoder_recover_roi_custom_scale(sample_bbox, custom_encoder):
"""Test recover_roi with custom scaling factors."""
ref_pos = custom_encoder.get_roi_position(sample_bbox)
scaled_dims = custom_encoder.get_roi_size(sample_bbox)
recovered_bbox = custom_encoder.recover_roi(ref_pos, scaled_dims)
assert isinstance(recovered_bbox, data.BoundingBox)
np.testing.assert_allclose(
recovered_bbox.coordinates, sample_bbox.coordinates, atol=1e-6
)
def test_bbox_encoder_recover_roi_zero_box(zero_bbox, default_encoder):
"""Test recover_roi for a zero-sized box."""
ref_pos = default_encoder.get_roi_position(zero_bbox)
scaled_dims = default_encoder.get_roi_size(zero_bbox)
recovered_bbox = default_encoder.recover_roi(ref_pos, scaled_dims)
np.testing.assert_allclose(
recovered_bbox.coordinates, zero_bbox.coordinates, atol=1e-6
)
def test_bbox_encoder_recover_roi_invalid_dims_shape(default_encoder):
"""Test recover_roi raises ValueError for incorrect dims shape."""
ref_pos = (10, 100)
with pytest.raises(ValueError):
default_encoder.recover_roi(ref_pos, np.array([1.0]))
with pytest.raises(ValueError):
default_encoder.recover_roi(ref_pos, np.array([1.0, 2.0, 3.0]))
with pytest.raises(ValueError):
default_encoder.recover_roi(ref_pos, np.array([[1.0], [2.0]]))
def test_build_roi_mapper():
"""Test build_roi_mapper creates a configured BBoxEncoder."""
config = BBoxAnchorMapperConfig(
anchor="top-right", time_scale=2.0, frequency_scale=20.0
)
mapper = build_roi_mapper(config)
assert isinstance(mapper, AnchorBBoxMapper)
assert mapper.anchor == config.anchor
assert mapper.time_scale == config.time_scale
assert mapper.frequency_scale == config.frequency_scale
@pytest.fixture
def sample_config_yaml_content() -> str:
"""YAML content for a sample ROIConfig."""
return f"""
position: center
time_scale: 500.0
frequency_scale: {1 / 1000.0}
"""
@pytest.fixture
def nested_config_yaml_content() -> str:
"""YAML content with ROIConfig nested under a field."""
return f"""
model_settings:
preprocessing:
whatever: true
roi_mapping:
position: bottom-right
time_scale: {DEFAULT_TIME_SCALE}
frequency_scale: 0.01
other_stuff: 123
"""
def test_load_roi_mapper_simple(tmp_path, sample_config_yaml_content):
"""Test loading a simple ROIConfig from YAML."""
config_path = tmp_path / "config.yaml"
config_path.write_text(sample_config_yaml_content)
mapper = load_roi_mapper(config_path)
assert isinstance(mapper, AnchorBBoxMapper)
assert mapper.anchor == "center"
assert mapper.time_scale == 500.0
assert mapper.frequency_scale == pytest.approx(1 / 1000.0)
def test_load_roi_mapper_nested(tmp_path, nested_config_yaml_content):
"""Test loading a nested ROIConfig from YAML using 'field'."""
config_path = tmp_path / "nested_config.yaml"
config_path.write_text(nested_config_yaml_content)
mapper = load_roi_mapper(config_path, field="model_settings.roi_mapping")
assert isinstance(mapper, AnchorBBoxMapper)
assert mapper.anchor == "bottom-right"
assert mapper.time_scale == DEFAULT_TIME_SCALE
assert mapper.frequency_scale == 0.01
def test_load_roi_mapper_file_not_found(tmp_path):
"""Test load_roi_mapper raises error if file doesn't exist."""
non_existent_path = tmp_path / "not_real.yaml"
with pytest.raises(FileNotFoundError):
load_roi_mapper(non_existent_path)
def test_load_roi_mapper_invalid_field(tmp_path, sample_config_yaml_content):
"""Test load_roi_mapper raises error for invalid field."""
config_path = tmp_path / "config.yaml"
config_path.write_text(sample_config_yaml_content)
with pytest.raises(KeyError):
load_roi_mapper(config_path, field="invalid.path")