Commit Graph

Select branches

Hide Pull Requests

conda-dependencies-fix

dev

feat/GH-7-filename-in-console-output

feat/add-chunk-size-to-cli

feat/migrate-to-numpy-2

feat/migrate-to-uv

fix/GH-10-merge-results-index-error

fix/GH-15-spectrogram-features-computation

fix/GH-30-torch-deprecation-warning-weights-only

fix/GH-31-negative-dimension-are-not-allowed

fix/GH-5-time-expansion-is-not-read

fix/handle-empty-files-gracefully

fix/update-dependencies

fix/update-python-version-support

issue-20

main

test/add_audio_files_provided_by_padpadpadpad_to_test_suite

train

#11

#12

#16

#2

#21

#25

#32

#33

#34

#35

#36

#37

#38

#39

#4

#44

#45

#52

#6

#8

v1.0

v1.0.1

v1.0.2

v1.0.3

v1.0.4

v1.0.5

v1.0.6

v1.0.7

v1.0.8

v1.1.0

v1.1.1

v1.2.0

v1.3.0

Mono Color

• a4b22d6590 Improve the pad_audio function mbsantiago 2024-11-10 22:39:10 +0000
• 25e0a53ad1 Add hypothesis to dev dependencies for easier testing mbsantiago 2024-11-10 22:38:13 +0000
• 039c002796 Remove unnecessary imports mbsantiago 2024-11-10 22:37:57 +0000
• c97a87b2a4 Remove numba debug logging for easier debugging mbsantiago 2024-11-10 22:37:45 +0000
• d93d8284d0 Added a test that replicates the error mbsantiago 2024-11-10 20:06:58 +0000
• 697b5dbddb
  Merge pull request #35 from macaodha/fix/update-python-version-support Santiago Martinez Balvanera 2024-11-10 19:52:42 +0000
• d5bf8f5ad8 Drop 3.9 and add 3.12 to python-version matrix in test github workflow fix/update-python-version-support mbsantiago 2024-11-10 19:46:12 +0000
• fcbccbe012 Update uv lock mbsantiago 2024-11-10 19:45:01 +0000
• 4917641e2c Drop support for python 3.8 and add for 3.12 mbsantiago 2024-11-10 19:44:57 +0000
• 39c3918103
  Merge pull request #34 from macaodha/feat/migrate-to-numpy-2 Santiago Martinez Balvanera 2024-11-10 19:17:33 +0000
• 1ac3808fee Remove the numpy<2 requirement from the dependencies specification feat/migrate-to-numpy-2 mbsantiago 2024-11-10 19:13:44 +0000
• 9e0ad7fd78 address all linting errors from rule NPY201 mbsantiago 2024-11-10 19:13:30 +0000
• 95bb0985e7 Add ruff rule to help migrating to numpy 2.0 mbsantiago 2024-11-10 19:13:11 +0000
• cb088359ae
  Merge pull request #33 from macaodha/feat/migrate-to-uv Santiago Martinez Balvanera 2024-11-10 19:04:47 +0000
• c5030123aa Restrict pytorch version for python 3.8 compatibility feat/migrate-to-uv mbsantiago 2024-11-10 18:59:35 +0000
• 1c1fbd8019 Added dev dependencies and updated github actions to use uv mbsantiago 2024-11-10 18:32:00 +0000
• c65fe1c9f9 change pyproject metadata to use uv and hatch instead of pdm mbsantiago 2024-11-10 18:20:18 +0000
• d05bec880a
  Merge pull request #32 from ccarrizosa/fix/np_exception Santiago Martinez Balvanera 2024-11-10 18:15:31 +0000
• 8597ef0a1c Limit numpy versions to <2 ccarrizosa 2024-11-10 15:54:16 +0100
• 2d8a7b67f8 Revert support for newest numpy versions. ccarrizosa 2024-11-10 15:54:01 +0100
• 68351d2224 Fix numpy exception handling ccarrizosa 2024-11-09 22:35:11 +0100
• 3f34164028 update gitignore mbsantiago 2024-10-15 22:39:27 +0100
• d84b7795f6 Updating training preprocess notebook mbsantiago 2024-10-15 22:38:47 +0100
• f63307757c Add the model back mbsantiago 2024-08-01 15:39:48 +0100
• d34b360b8b Adding notebook folder mbsantiago 2024-07-16 01:32:01 +0100
• db26e0d4dd Update soundevent version mbsantiago 2024-07-16 01:31:19 +0100
• 976b6a3b35 added preprocess folder to gitignore mbsantiago 2024-07-16 01:31:13 +0100
• bc821835f1 add methods to load and save preprocessing config mbsantiago 2024-07-16 01:31:02 +0100
• 4973cfcc5f Fixed labeled dataset indexing error when loading mbsantiago 2024-07-16 01:30:52 +0100
• 335a05d51a Decouple config loading from preprocess function mbsantiago 2024-07-16 01:30:34 +0100
• 17cf958cd3 Working towards training code mbsantiago 2024-05-23 13:04:55 +0100
• c66d14b7c7 WIP updating training code mbsantiago 2024-04-24 10:06:04 -0600
• 343bc5f87c Merge branch 'main' into train Santiago Martinez 2024-02-02 11:05:35 +0000
• 3744709c97 Bump version: 1.0.7 → 1.0.8 v1.0.8 Santiago Martinez 2024-01-30 12:41:32 +0000
• 875a581044
  Merge pull request #25 from macaodha/fix/update-dependencies Santiago Martinez Balvanera 2024-01-30 12:40:54 +0000
• c40197bf1c Lower scipy version to support python 3.8 fix/update-dependencies Santiago Martinez 2024-01-30 12:36:25 +0000
• bbba4625be Add support for python 3.11. Update dependencies requirements Santiago Martinez 2024-01-30 12:34:47 +0000
• 0aa61af445 Added types to most functions Santiago Martinez 2024-01-14 17:15:22 +0000
• 458e11cf73 Updated soundevent version Santiago Martinez 2024-01-12 17:23:24 +0000
• a8f64d172b Merge branch 'main' into train Santiago Martinez 2023-11-30 11:49:50 +0000
• 963cc53fd3 Bump version: 1.0.6 → 1.0.7 v1.0.7 Santiago Martinez 2023-11-24 15:41:50 +0000
• 860e63dddf fix: implemented a cleaning step to remove detections above the nyquist limit Santiago Martinez 2023-11-24 15:40:58 +0000
• 986cfc463c tests: Added a test to check that detections above the nyquist freq are excluded Santiago Martinez 2023-11-24 15:40:37 +0000
• 39b328031d Update the file count assert in test_list_audio_files() Mike Evans 2023-10-10 08:14:56 +0100
• e368b47aa8 Add zero size file for testing. issue-20 Mike Evans 2023-10-09 14:08:14 +0100
• 9b04049fbe Potential fix for issuu#20 Mike Evans 2023-10-09 11:27:02 +0100
• 14aefafe14
  Update README.md Oisin Mac Aodha 2023-08-25 10:36:59 +0100
• 1cef6e37e0
  Update README.md Oisin Mac Aodha 2023-08-25 10:35:23 +0100
• 9baf60ff2d Bump version: 1.0.5 → 1.0.6 v1.0.6 Santiago Martinez 2023-08-03 12:42:52 +0100
• 70877495d4
  Merge pull request #16 from macaodha/fix/GH-15-spectrogram-features-computation Oisin Mac Aodha 2023-08-03 12:36:19 +0100
• 3288f52bbd tests: added tests for feature computation fix/GH-15-spectrogram-features-computation Santiago Martinez 2023-08-03 11:45:39 +0100
• 8e8779a72e fix: call interval kwargs name error Santiago Martinez 2023-08-02 20:07:56 +0100
• 36d616530a tests: Added test for using the spec_feature flag Santiago Martinez 2023-08-02 20:00:56 +0100
• 14d001a71c
  Merge pull request #12 from arky/minor-fixes Oisin Mac Aodha 2023-06-28 13:48:10 +0100
• a54d197fdf Minor typos fixed Arky 2023-06-16 20:02:05 +0700
• cca883a730 Bump version: 1.0.4 → 1.0.5 v1.0.5 Santiago Martinez 2023-05-11 14:06:58 +0100
• e5370e98db
  Merge pull request #11 from macaodha/fix/GH-10-merge-results-index-error Santiago Martinez Balvanera 2023-05-11 14:05:57 +0100
• 04af74228b fix: the case of no detections is now handled better fix/GH-10-merge-results-index-error Santiago Martinez 2023-05-11 13:59:20 +0100
• 10d090cc14 Bump version: 1.0.3 → 1.0.4 v1.0.4 Santiago Martinez 2023-05-01 18:04:25 +0100
• 69c087bc20
  Merge pull request #8 from macaodha/feat/GH-7-filename-in-console-output Santiago Martinez Balvanera 2023-05-01 18:02:41 +0100
• 327f741aa2 feat: added filename to console output in cli feat/GH-7-filename-in-console-output Santiago Martinez 2023-05-01 17:51:18 +0100
• 2ddd2c022e Bump version: 1.0.2 → 1.0.3 v1.0.3 Santiago Martinez 2023-05-01 15:18:09 +0100
• 740ec6c359 Bump version: 1.0.2 → 1.0.3 fix/GH-5-time-expansion-is-not-read Santiago Martinez 2023-05-01 15:17:22 +0100
• 3d7ffae02a
  Merge pull request #6 from macaodha/fix/GH-5-time-expansion-is-not-read Santiago Martinez Balvanera 2023-05-01 15:12:50 +0100
• b71cb8c755 fix: CLI now reads time_expansion_factor correctly Santiago Martinez 2023-05-01 15:04:29 +0100
• 54d83219f1 Bump version: 1.0.1 → 1.0.2 v1.0.2 Santiago Martinez 2023-04-29 15:43:53 +0100
• 28dc435351 fix: added bump2version config to gitignore Santiago Martinez 2023-04-29 15:43:39 +0100
• 715db9a110 fix: move spectrogram to cpu when plotting Santiago Martinez 2023-04-29 15:39:45 +0100
• 616a24347d fix: Updated torch version to avoid security issue Santiago Martinez 2023-04-29 15:33:40 +0100
• 57f2b50239 fix: move tensors to cpu when converting to numpy Santiago Martinez 2023-04-29 15:30:25 +0100
• 68d3842931 v1.0.1 v1.0.1 Santiago Martinez 2023-04-13 08:29:22 -0600
• f4e0c6013e Fix: In pyproject.toml, project scripts reference to bat_detect updated. Santiago Martinez 2023-04-13 08:23:29 -0600
• b252f23093 WIP Santiago Martinez 2023-04-13 07:58:01 -0600
• 1417fce44f
  Create python-publish.yml v1.0 Santiago Martinez Balvanera 2023-04-13 07:55:51 -0600
• c865b53c17 fixed missing get_default_db_config function Santiago Martinez 2023-04-07 16:26:01 -0600
• 178fa518c3 update gitignore to include models Santiago Martinez 2023-04-07 15:50:44 -0600
• e8fd4e2931 version 1.0 Santiago Martinez 2023-04-07 15:47:16 -0600
• c2c9652a04 Finetune gradio app Santiago Martinez 2023-04-07 15:46:28 -0600
• 0f97d51086 freq axis ticks Santiago Martinez 2023-04-07 15:46:18 -0600
• 85092e846b Better frequency axis tick values Santiago Martinez 2023-04-07 15:46:04 -0600
• 0a7ad18193 Updated gradio app to new api Santiago Martinez 2023-04-07 15:20:27 -0600
• b8bbfe8ad4 updated extract spec slices bit Santiago Martinez 2023-04-07 15:20:15 -0600
• 5e08607eec Updated notebook Santiago Martinez 2023-04-07 14:46:54 -0600
• 638b5c578e Added plot module Santiago Martinez 2023-04-07 14:46:48 -0600
• 0a22f1798e Checked that returned features is a 2d numpy array Santiago Martinez 2023-04-07 14:46:38 -0600
• 29074c689e Add warning to finetuning modules Santiago Martinez 2023-04-07 11:27:09 -0600
• 9e79849d6f Changed bat_detect to batdetect2 Santiago Martinez 2023-04-07 11:24:22 -0600
• 7c80441d60
  Merge pull request #4 from macaodha/dev Oisin Mac Aodha 2023-04-07 15:06:10 +0100
• 80792f22d1
  Create python-package.yml Santiago Martinez Balvanera 2023-03-30 12:04:05 -0600
• b94a7760d3 Merge branch 'main' into dev dev Santiago Martinez 2023-03-30 12:01:56 -0600
• 22a2c70661 Minor README formatting Santiago Martinez 2023-03-30 11:58:14 -0600
• 148611bac0 Minor README formatting Santiago Martinez 2023-03-30 11:55:41 -0600
• 2d8d175f3f Updated README with new installation instructions and API Santiago Martinez 2023-03-30 11:52:42 -0600
• b0c3dbe403 Added documentation to the API module Santiago Martinez 2023-03-30 11:24:13 -0600
• cb650c265b Pyright config Santiago Martinez 2023-03-30 11:24:05 -0600
• 5b73b65b1a Added pytest to dev dependencies Santiago Martinez 2023-03-30 10:44:52 -0600
• 3c6600afcb fixed librosa core.spectrum import Santiago Martinez 2023-03-20 11:22:29 +0000
• ad1c345751 updated run_batdetect script Santiago Martinez 2023-03-20 11:14:14 +0000
• 0aa3d9d1e0 added model file Santiago Martinez 2023-03-20 11:11:05 +0000
• 74e8283576 update run_batdetect command Santiago Martinez 2023-03-20 11:09:41 +0000