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conda-dependencies-fix

dev

feat/GH-7-filename-in-console-output

feat/add-chunk-size-to-cli

feat/migrate-to-numpy-2

feat/migrate-to-uv

fix/GH-10-merge-results-index-error

fix/GH-15-spectrogram-features-computation

fix/GH-30-torch-deprecation-warning-weights-only

fix/GH-31-negative-dimension-are-not-allowed

fix/GH-5-time-expansion-is-not-read

fix/handle-empty-files-gracefully

fix/update-dependencies

fix/update-python-version-support

issue-20

main

no_preprocessing

remove_xarray

test/add_audio_files_provided_by_padpadpadpad_to_test_suite

train

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#25

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#44

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• ba670932d5
  Update README.md Kavi Askholm Mellerup 2025-06-03 14:26:54 +0200
• d3747c57f2
  Update README.md Kavi Askholm Mellerup 2025-06-03 14:20:20 +0200
• 42a838e9f2 Bump version: 1.2.0 → 1.3.0 v1.3.0 mbsantiago 2025-05-16 15:02:15 +0100
• c10903a646
  Merge pull request #44 from kaviecos/http_support Santiago Martinez Balvanera 2025-05-16 15:01:08 +0100
• 4282e2ae70 Added AudioPath as an alias for the path definition Kavi 2025-05-16 15:13:08 +0200
• 52570738f2 Renamed load_audio_data to load_audio_and_samplerate Kavi 2025-05-16 14:56:35 +0200
• cbd362d6ea Updated docstrings for tests Kavi 2025-05-16 14:53:35 +0200
• 835fe1ccdf Remove old requirements files mbsantiago 2025-05-16 08:55:38 +0100
• b819180656 Add preprocess command to init mbsantiago 2025-05-01 07:15:35 +0100
• fdab0860fd Add num workers to cli mbsantiago 2025-04-30 23:40:26 +0100
• 3b5623ddca create train cli command mbsantiago 2025-04-30 23:27:38 +0100
• 2913fa59a4 Fix tests mbsantiago 2025-04-30 22:51:49 +0100
• 9c8b8fb200 Create metrics mbsantiago 2025-04-30 22:51:33 +0100
• bc86c94f8e Adding evaluation callback mbsantiago 2025-04-25 17:12:57 +0100
• 9106b9f408 Removing stale functions from legacy module mbsantiago 2025-04-25 17:12:39 +0100
• 899f74efd5 Wrote the main train function mbsantiago 2025-04-24 10:00:18 +0100
• 4b4c3ecdf5 Added loguru as a dependency mbsantiago 2025-04-24 00:20:58 +0100
• 13afac65a5 Added an example conf file mbsantiago 2025-04-24 00:20:46 +0100
• d8cf1db19f Fix augmentations mbsantiago 2025-04-24 00:20:38 +0100
• 8a6ed3dec7 Starting to add logging to preprocess mbsantiago 2025-04-24 00:20:30 +0100
• 7dd35d6e3e Refine training config mbsantiago 2025-04-23 23:35:42 +0100
• d51e3f8bbd Rollback to single configs module mbsantiago 2025-04-23 23:35:27 +0100
• f3999fbba2 Starting to create a dedicated configs module mbsantiago 2025-04-23 23:19:23 +0100
• 2a45859393 Run lint fix mbsantiago 2025-04-23 23:19:08 +0100
• 86d56d65f4 Added jupyter and marimo group dependencies mbsantiago 2025-04-23 23:15:40 +0100
• 27ba8de463 Updated soundevent mbsantiago 2025-04-23 23:15:29 +0100
• 59bd14bc79 Added clips for random cliping and augmentations mbsantiago 2025-04-23 23:15:08 +0100
• 2396815c13 Add a default target config mbsantiago 2025-04-23 23:14:39 +0100
• ac4bb8f023 Added min and max freq attributes to preprocessor protocol mbsantiago 2025-04-23 23:14:31 +0100
• 6498b6ca37 Added BlockGroups mbsantiago 2025-04-23 23:14:11 +0100
• bfcab0331e Attend test warnings mbsantiago 2025-04-22 09:17:17 +0100
• c276230bff Fix batdetect2 test mbsantiago 2025-04-22 09:08:29 +0100
• e38c446f59 Update gitignore mbsantiago 2025-04-22 09:06:12 +0100
• 24c4831745 Add example annotations mbsantiago 2025-04-22 09:06:06 +0100
• 9fc713d390 Temporary remove compat params module mbsantiago 2025-04-22 09:01:58 +0100
• 285c6a3347 Updating to new Augmentation object mbsantiago 2025-04-22 09:01:46 +0100
• 541be15c9e Update augmentation tests to new structure mbsantiago 2025-04-22 09:00:57 +0100
• 8a463e3942 Remove test migration mbsantiago 2025-04-22 09:00:44 +0100
• 257e1e01bf Fixing small errors in tests mbsantiago 2025-04-22 08:51:21 +0100
• ece1a2073d Fixed errors with extraction test mbsantiago 2025-04-22 08:50:56 +0100
• b82973ca1d Move array and tensor util test to corresponding folder mbsantiago 2025-04-22 08:50:43 +0100
• 7c89e82579 Fixing imports after restructuring mbsantiago 2025-04-22 00:36:34 +0100
• dcae411ccb Add pytest coverage to dev dependencies mbsantiago 2025-04-21 21:26:01 +0100
• ce15afc231 Restructured models module mbsantiago 2025-04-21 21:25:50 +0100
• 096d180ea3 Create an encoder module mbsantiago 2025-04-21 15:28:56 +0100
• ffa4c2e5e9 Remove unnecessary config and build modules mbsantiago 2025-04-21 15:28:47 +0100
• 6c744eaac5 Improved docstrings for blocks mbsantiago 2025-04-21 15:28:26 +0100
• e00674f628 Added better docstrings to types module mbsantiago 2025-04-21 14:06:16 +0100
• 907e05ea48 Minor changes to makefile mbsantiago 2025-04-21 13:21:52 +0100
• 3123d105fd Created a Makefile mbsantiago 2025-04-21 13:18:41 +0100
• 9b6b8a0bf9 Add postprocessing docs mbsantiago 2025-04-20 18:18:58 +0100
• 4aa2e6905c Remove old post_process module mbsantiago 2025-04-20 17:56:07 +0100
• 3abebc9c17 Added working postprocess decoding tests mbsantiago 2025-04-20 17:53:56 +0100
• 1f4454693e Working on postprocess tests mbsantiago 2025-04-20 15:52:25 +0100
• bcf339c40d Updated postprocess module with docstrings mbsantiago 2025-04-20 13:56:18 +0100
• 089328a4f0 Update targets docs mbsantiago 2025-04-19 20:35:34 +0100
• 6236e78414 Update TargetProtocol and related to include rois mbsantiago 2025-04-19 20:26:18 +0100
• 9410112e41 Create targets.rois module mbsantiago 2025-04-19 19:43:30 +0100
• 07f065cf93 Rename Preprocessor to PreprocessorProtocol mbsantiago 2025-04-19 12:25:41 +0100
• ae6063918c Add documentation on how to use the legacy format mbsantiago 2025-04-19 12:25:20 +0100
• a0a77cada1 Attach a data_source tag to clips loaded from different sources mbsantiago 2025-04-19 12:25:03 +0100
• 355847346e Added a data_source term. mbsantiago 2025-04-19 12:24:38 +0100
• dfd14df7b9 Added a targets protocol mbsantiago 2025-04-19 12:24:24 +0100
• f353aaa08c Added unit tests to legacy annotation loader mbsantiago 2025-04-18 18:39:58 +0100
• bf14f4d37e Added docstrings for the batdetect2 legacy annotation format mbsantiago 2025-04-18 15:14:48 +0100
• b78e5a3a2f Add AOEF loading documentation mbsantiago 2025-04-18 13:53:00 +0100
• f9e005ec8b Add tests for aoef loading mbsantiago 2025-04-18 13:32:50 +0100
• fd7f2b0081 Added unit tests for spectrogram preprocessing mbsantiago 2025-04-17 18:31:24 +0100
• f314942628 Added more docs for preprocessing module mbsantiago 2025-04-17 16:28:48 +0100
• 638f93fe92 Documented the preprocessing module mbsantiago 2025-04-17 15:56:07 +0100
• 19febf2216 Separated the protocols to separate types module mbsantiago 2025-04-17 15:36:21 +0100
• 3417c496db Changed name of PcenScaleConfig to PcenConfig mbsantiago 2025-04-17 15:35:42 +0100
• 4a9af72580 Moved arrays and tensor operations to utils module mbsantiago 2025-04-17 15:35:17 +0100
• 2212246b11 Add documentation to spectrogram mbsantiago 2025-04-17 14:40:20 +0100
• aca0b58443 Add audio test suite mbsantiago 2025-04-17 13:48:21 +0100
• f5071d00a1 Add audio documentation mbsantiago 2025-04-16 19:51:10 +0100
• 23620c2233 Added docstrings to audio module mbsantiago 2025-04-16 19:44:30 +0100
• a9f91322d4 Moved labels.py back to training mbsantiago 2025-04-16 19:44:23 +0100
• 22036743d1 Add target index documentation mbsantiago 2025-04-16 11:01:21 +0100
• eda5f91c86 Update classes mbsantiago 2025-04-16 00:01:37 +0100
• a2ec190b73 Add decode functions to classes module mbsantiago 2025-04-15 23:56:24 +0100
• 04ed669c4f Update gitignore mbsantiago 2025-04-15 22:34:50 +0100
• b796e0bc7b add docs for configs module mbsantiago 2025-04-15 22:34:45 +0100
• 5d4d9a5edf Begin documentation mbsantiago 2025-04-15 20:29:53 +0100
• 55eff0cebd Fix import error mbsantiago 2025-04-15 20:29:29 +0100
• f99653d68f Added labels documentation mbsantiago 2025-04-15 19:33:45 +0100
• 0778663a2c Add extensive documentation for the labels module mbsantiago 2025-04-15 19:25:58 +0100
• 62471664fa Add tests for target.classes mbsantiago 2025-04-15 18:22:19 +0100
• af48c33307 Add target classes module mbsantiago 2025-04-15 07:32:58 +0100
• 02d4779207 Add test for target filtering mbsantiago 2025-04-14 13:31:30 +0100
• d97614a10d Add transform docs mbsantiago 2025-04-13 17:30:39 +0100
• 991529cf86 Create transform module mbsantiago 2025-04-13 16:43:13 +0100
• 02c1d97e5a Add documentation for batdetect2.targets.terms mbsantiago 2025-04-13 14:11:48 +0100
• 3f3f7cd9c8 Add documentation mbsantiago 2025-04-12 18:05:26 +0100
• 2fb3039f17 Create dedicated filtering module mbsantiago 2025-04-12 18:05:20 +0100
• 26a2c5c851 Modify to numpydoc style mbsantiago 2025-04-12 18:05:02 +0100
• b93d4c65c2 Create separate targets module mbsantiago 2025-04-12 16:48:40 +0100
• acda71ea45 Formatting mbsantiago 2025-04-04 10:58:54 +0100
• 98c6da6d42 Removed non needed info on datasets mbsantiago 2025-04-03 16:51:30 +0100
• fe8d044af2 Using basedpyright mbsantiago 2025-04-03 16:50:58 +0100