248 Commits

Author	SHA1	Message	Date
mbsantiago	daff74fdde	Moved decoding to outputs	2026-03-18 01:35:34 +00:00
mbsantiago	31d4f92359	reformat	2026-03-18 00:41:45 +00:00
mbsantiago	d56b9f02ae	Remove num_worker from config	2026-03-18 00:22:59 +00:00
mbsantiago	573d8e38d6	Ran formatter	2026-03-18 00:03:26 +00:00
mbsantiago	751be53edf	Moving types around to each submodule	2026-03-18 00:01:35 +00:00
mbsantiago	c226dc3f2b	Add outputs module	2026-03-17 23:00:26 +00:00
mbsantiago	3b47c688dd	Update api_v2	2026-03-17 22:25:41 +00:00
mbsantiago	feee2bdfa3	Add scheduler and optimizer module	2026-03-17 21:16:41 +00:00
mbsantiago	615c7d78fb	Added a full test of training and saving	2026-03-17 15:38:07 +00:00
mbsantiago	56f6affc72	use train config in training module	2026-03-17 14:16:40 +00:00
mbsantiago	65bd0dc6ae	Restructure model config	2026-03-17 13:33:13 +00:00
mbsantiago	1a7c0b4b3a	Removing legacy types	2026-03-17 12:53:03 +00:00
mbsantiago	8ac4f4c44d	Add dynamic imports to existing registries	2026-03-16 10:04:34 +00:00
mbsantiago	038d58ed99	Add config for dynamic imports, and tests	2026-03-16 09:30:23 +00:00
mbsantiago	e0503487ec	Remove deprecated types	2026-03-15 21:17:20 +00:00
mbsantiago	4b7d23abde	Create data annotation loader registry	2026-03-15 20:53:59 +00:00
mbsantiago	0d590a26cc	Update tests	2026-03-08 18:41:05 +00:00
mbsantiago	46c02962f3	Add test for preprocessing	2026-03-08 17:11:27 +00:00
mbsantiago	bfc88a4a0f	Update audio loader docstrings	2026-03-08 17:02:35 +00:00
mbsantiago	ce952e364b	Update audio module docstrings	2026-03-08 17:02:25 +00:00
mbsantiago	ef3348d651	Update model docstrings	2026-03-08 16:34:17 +00:00
mbsantiago	4207661da4	Add test for backbones	2026-03-08 16:04:54 +00:00
mbsantiago	45e3cf1434	Modify example config to add name	2026-03-08 15:23:14 +00:00
mbsantiago	f2d5088bec	Run formatter	2026-03-08 15:18:21 +00:00
mbsantiago	652d076b46	Add backbone registry	2026-03-08 15:02:56 +00:00
mbsantiago	e393709258	Add interfaces for encoder/decoder/bottleneck	2026-03-08 14:43:16 +00:00
mbsantiago	54605ef269	Add blocks and detector tests	2026-03-08 14:17:47 +00:00
mbsantiago	6812e1c515	Update default detection class config	2026-03-08 13:17:23 +00:00
mbsantiago	d52e988b8f	Fix type errors	2026-03-08 12:55:36 +00:00
mbsantiago	cce1b49a8d	Run formatting	2026-03-08 08:59:28 +00:00
mbsantiago	8313fe1484	Minor formatting	2026-03-07 16:09:43 +00:00
mbsantiago	4509602e70	Run automated fixes	2025-12-12 21:29:25 +00:00
mbsantiago	0adb58e039	Run formatter	2025-12-12 21:28:28 +00:00
mbsantiago	531ff69974	Cleanup evaluate	2025-12-12 21:14:31 +00:00
mbsantiago	750f9e43c4	Make sure threshold is used	2025-12-12 19:53:15 +00:00
mbsantiago	f71fe0c2e2	Using matching and affinity functions from soundevent	2025-12-12 19:25:01 +00:00
mbsantiago	113f438e74	Run lint fixes	2025-12-08 17:19:33 +00:00
mbsantiago	2563f26ed3	Update type hints to python 3.10	2025-12-08 17:14:50 +00:00
mbsantiago	9c72537ddd	Add parquet format for outputs	2025-12-08 17:11:35 +00:00
mbsantiago	202c6cbab0	Fix tests	2025-11-28 18:10:37 +00:00
mbsantiago	7336638fa9	Add average precision computation to pr curves if needed	2025-11-22 00:34:42 +00:00
mbsantiago	16c401b1da	Add method to compute attention weights	2025-11-22 00:34:31 +00:00
mbsantiago	4ecbc2b734	Add function to facilitate task evaluation	2025-11-22 00:34:23 +00:00
mbsantiago	dbd2d30ead	save predictions as individual nc files for speed	2025-11-19 13:54:57 +00:00
mbsantiago	bdb9e18964	Add explicit kwarg name to _freq_to_index to avoid confusion	2025-11-16 23:57:11 +00:00
mbsantiago	a4498cfd83	Add functional versions of metric and plotting utils	2025-11-16 21:37:47 +00:00
mbsantiago	960b9a92e4	Fix legacy import to use reproducible UUIDs	2025-11-16 21:37:33 +00:00
mbsantiago	76503fbd12	Fix order of config merge	2025-11-12 00:17:25 +00:00
mbsantiago	69921f258a	Add GreedyAffinityMatching as an alternative to optimal affinity matching	2025-11-10 19:28:47 +00:00
mbsantiago	6039b2c3eb	Avoid empty strings as tags in legacy format conversion	2025-11-10 19:28:15 +00:00
mbsantiago	efc996a0db	Add targets to data summary command	2025-11-10 19:27:31 +00:00
mbsantiago	110432bd40	Added batch_size and num_workers to API	2025-10-29 12:13:16 +00:00
mbsantiago	401a3832ce	Add other output formats	2025-10-27 19:39:20 +00:00
mbsantiago	5736421023	Add arguments to train cli	2025-10-14 18:19:33 +01:00
mbsantiago	3913d2d350	Add merge config option	2025-10-14 18:05:12 +01:00
mbsantiago	24dcc47e73	Fix import of DEFAULT_CHECKPOINT_DIR	2025-10-04 15:16:11 +01:00
mbsantiago	160cb6ae30	Add checkpoint config	2025-10-04 15:08:34 +01:00
mbsantiago	2d796394f6	Store anns and preds instead of evals in EvaluatorModule	2025-09-30 19:10:07 +01:00
mbsantiago	49ec1916ce	Fix API after module name change	2025-09-30 18:24:06 +01:00
mbsantiago	8727edf466	Save checkpoint on max class mAP	2025-09-30 18:20:31 +01:00
mbsantiago	2f48c58de1	api_v2	2025-09-30 13:56:25 +01:00
mbsantiago	981e37c346	Writing batch inference code	2025-09-30 13:22:03 +01:00
mbsantiago	30159d64a9	Update example config	2025-09-28 16:22:21 +01:00
mbsantiago	c9f0c5c431	Added bbox iou affinity function	2025-09-28 16:08:21 +01:00
mbsantiago	10865ee600	Re-org gallery example plots	2025-09-28 15:45:48 +01:00
mbsantiago	87ed44c8f7	Plotting reorganised	2025-09-27 23:58:06 +01:00
mbsantiago	df2abff654	Task/Metrics restructure	2025-09-26 15:23:38 +01:00
mbsantiago	d6ddc4514c	Better evaluation organisation	2025-09-25 17:48:29 +01:00
mbsantiago	4cd983a2c2	Better train cli arg names	2025-09-18 09:44:27 +01:00
mbsantiago	e65df81db2	Evaluate using Lightning too to handle device changes	2025-09-18 09:28:21 +01:00
mbsantiago	6c25787123	Logging is not just for training	2025-09-18 09:27:40 +01:00
mbsantiago	8c80402f08	Move clips and audio to dedicated module	2025-09-18 09:27:24 +01:00
mbsantiago	b81a882b58	Add metrics and plots	2025-09-17 10:30:24 +01:00
mbsantiago	957c0735d2	Starting new API	2025-09-16 19:39:30 +01:00
mbsantiago	bbb96b33a2	Config restructuring	2025-09-16 18:57:56 +01:00
mbsantiago	7d6cba5465	Restructuring	2025-09-16 13:38:38 +01:00
mbsantiago	60e922d565	Use pascal voc map computation by default	2025-09-16 10:56:37 +01:00
mbsantiago	704b28292b	Cleaning train module	2025-09-15 16:50:08 +01:00
mbsantiago	e752e96b93	Restructure eval metrics and plotting	2025-09-15 16:01:15 +01:00
mbsantiago	ec1c0ff020	Better matching module, remove generic from classification evaluations	2025-09-14 18:16:59 +01:00
mbsantiago	8628133fd7	Compute mAP	2025-09-14 10:08:51 +01:00
mbsantiago	d80377981e	Fix plotting	2025-09-14 09:38:45 +01:00
mbsantiago	ad5293e0d0	Ad FileNotFoundError to plotting	2025-09-13 20:05:42 +01:00
mbsantiago	01e7a5df25	Add ignore at ends when evaluating	2025-09-13 19:03:40 +01:00
mbsantiago	6d70140bc9	Default to normal anchor	2025-09-13 13:56:47 +01:00
mbsantiago	4fd2e84773	Fix clip missalignment in validation dataset	2025-09-11 11:09:59 +01:00
mbsantiago	e65d5a6846	Added more clipping options for validation	2025-09-10 21:09:51 +01:00
mbsantiago	615c811bb4	Add detection_class_name to targets protocol	2025-09-09 20:30:20 +01:00
mbsantiago	41b18c3f0a	Better order for checkpoints	2025-09-09 15:56:46 +01:00
mbsantiago	16a0fa7b75	Add targets to train cli	2025-09-09 15:45:00 +01:00
mbsantiago	115084fd2b	Updat lightning version	2025-09-09 15:31:40 +01:00
mbsantiago	951dc59718	Add seed option to train	2025-09-09 13:23:56 +01:00
mbsantiago	3376be06a4	Add experiment name	2025-09-09 09:02:25 +01:00
mbsantiago	cd4955d4f3	Eval	2025-09-08 22:04:30 +01:00
mbsantiago	c73984b213	Small fixes	2025-09-08 18:35:02 +01:00
mbsantiago	d8d2e5a2c2	Remove preprocessing modules	2025-09-08 18:11:58 +01:00
mbsantiago	b056d7d28d	Make sure training is still working	2025-09-08 18:03:56 +01:00
mbsantiago	95a884ea16	Update tests	2025-09-08 18:00:17 +01:00
mbsantiago	b7ae526071	Big changes in data module	2025-09-08 17:50:25 +01:00
mbsantiago	cf6d0d1ccc	Remove stale tests	2025-09-07 11:03:46 +01:00